CROMENT Workshop on biodiversity data and the GBIF network 2024

Institute for Environment and Nature (Zavod za zaštitu okoliša i prirode) of the Ministry of Economy and Sustainable Development

February 19-23, 2024

9:00 - 17:00 CET

Instructors: Dimitri Brosens, André Heughebaert

Helpers: Luka Katušić, Silvija Ajredini, Petra Rodić, Gabrijela Šestani

General Information

In February, a full week of GBIF immersion will be organized in Croatia. Next to a GBIF community workshop, where we will learn on how GBIF works, we will also organize 2 full days on data cleaning and publication. These 2 days (February 21 and 22th) are intended to be a hands-on workshop focused on mobilizing biological observation datasets to the Global Biodiversity Information Facility (GBIF) by helping data providers standardize their data using Darwin Core including species observations from any type of sampling methodologies (e.g. visual surveys, microscopy, imaging, telemetry). The other 3 days are dedicated to setting op the GBIF node in Croatia in the framework of the GBIF CESP CROMENT (Mentoring Croatia) project. This workshop is organized by a The Belgian Biodiversity Platform & the Croatian Institute for Environment and Nature & The Habitat Foundation. For more information on the Croment procject, visit this website

Croatia Belgian GBIF node CESP GBIF THF Belspo

Hands on Data Workshop

What the data workshop will cover:

The goal is that by the end of the workshop you will have a dataset in a final standardized state and shared to GBIF. We are hoping to address some of the identified blockers, including: lack of time, training, and specific formatting questions.

some pictures

Group picture

Hands on Hands on Stakeholder exercise Nodes meeting Hands on

We have a short time together therefore our focus will be hands-on work in breakout rooms using the dataset you bring to the workshop. We will not have many presentations and they will be relatively short. Instead we will have large portions of time for you to work on your data and ask questions when you hit a stumbling block. Therefore, if you do not have a dataset to work on you may not find this workshop a good use of your time.

If you would like to learn more about GBIF and a short rationale for sharing data to it, please watch this three minute video and share them with those you want to work with to share data.

GBIF community workshop

What the GBIF community workshop will cover

In this workshop we will talk about how GBIF is organized globally as an infrastructure and how we can translate this in local practices. How a GBIF node is organized and how to setup a community around GBIF. How to communicate to stakeholders

Hands on technical workshop

What the technical workshop will cover

Some more pictures

Croatia Belgian GBIF node CESP Croatia Belgian GBIF node

Audience

The hands-on workshop is open for researchers, data curaters, data managers who have an interest in the publication of data on the Global Biodiversity Information Facility (GBIF) The GBIF community workshop is on invitation only. However the material available on this website could be of interest for anyone who is developping a GBIF Node and community.

The workshop is organized in the CESP project CROMENT, a GBIF funded project on capacity building.

Practical

Where: ZG Tower Annex, Big conference hall (Velika dvorana), 3rd floor, Radnička cesta 80, Zagreb. Get directions with OpenStreetMap or Google Maps.

When: February 19-23, 2024. Add to your Google Calendar.

Requirements: Participants must bring a laptop with a Mac, Linux, or Windows operating system (not a tablet, Chromebook, etc.) that they have administrative privileges on.

Accessibility: We are committed to making this workshop accessible to everybody. For workshops at a physical location, the workshop organizers have checked that:

Materials will be provided in advance of the workshop and large-print handouts are available if needed by notifying the organizers in advance. If we can help making learning easier for you (e.g. sign-language interpreters, lactation facilities) please get in touch (using contact details below) and we will attempt to provide them.

Contact: Please email d.brosens@biodiversity.be for more information.


Schedule

Times are in CET.

Overview recordings of each lesson can be found in this playlist.

February 22th

Hands on and technical workshop 'Integrated Publishing Toolkip(IPT)'

9:00 How to publish biodiversity data through GBIF.org
10:00 How to become a data publisher
10:30 Break
11:00 IPT administration & customization
12:00 Lunch
13:00 The GBIF Registry
14:00 GrSCiColl
14:30 Break
15:00 Hosted portals
15:30 Q&A and discussion
16:00 Finish

Setup

To participate in a workshop, you will need access to software as described below. In addition, you will need an up-to-date web browser.

We maintain a list of common issues that occur during installation as a reference for instructors that may be useful on the Configuration Problems and Solutions wiki page.